chemCast.weka
Class WekaClustering

java.lang.Object
  extended by DefaultSimilarityProcessor
      extended by chemCast.weka.AbstractWekaModel
          extended by chemCast.weka.WekaClustering
All Implemented Interfaces:
InstanceProcessor, ISubsetsModel

public class WekaClustering
extends AbstractWekaModel


Constructor Summary
WekaClustering()
           
 
Method Summary
 void build()
           
 Clusterer getClusterer()
           
 ChemCastDescriptorsList getDescriptors()
           
 IAmbitEditor getEditor()
           
 java.lang.String[] getProperties()
           
 java.lang.String getStatus(boolean verbose)
           
 void predict()
           
 float predict(IAtomContainersList object1, int index1, IAtomContainersList object2, int index2)
           
 void processInstance(Subsets datasets, int subsetIndex, int objectIndex, Instances instances, Instance instance)
           
 void setClusterer(Clusterer clusterer)
           
 void setDescriptors(ChemCastDescriptorsList descriptors)
           
 void setParameter(java.lang.Object parameter, java.lang.Object value)
           
 java.lang.String toString()
           
 
Methods inherited from class chemCast.weka.AbstractWekaModel
getClassificationProperty, getClassProperty, getDatasets, getParameter, getPredictedProperty, isInProgress, isUseAtomEnvironments, isUseFingerprints, setClassificationProperty, setClassProperty, setDatasets, setInProgress, setPredictedProperty, setUseAtomEnvironments, setUseFingerprints
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

WekaClustering

public WekaClustering()
Method Detail

predict

public float predict(IAtomContainersList object1,
                     int index1,
                     IAtomContainersList object2,
                     int index2)
              throws AmbitException
Throws:
AmbitException

build

public void build()
           throws QSARModelException
Overrides:
build in class AbstractWekaModel
Throws:
QSARModelException

predict

public void predict()
             throws QSARModelException
Overrides:
predict in class AbstractWekaModel
Throws:
QSARModelException

processInstance

public void processInstance(Subsets datasets,
                            int subsetIndex,
                            int objectIndex,
                            Instances instances,
                            Instance instance)
                     throws java.lang.Exception
Throws:
java.lang.Exception

getDescriptors

public ChemCastDescriptorsList getDescriptors()
Overrides:
getDescriptors in class AbstractWekaModel

setDescriptors

public void setDescriptors(ChemCastDescriptorsList descriptors)
Overrides:
setDescriptors in class AbstractWekaModel

setParameter

public void setParameter(java.lang.Object parameter,
                         java.lang.Object value)
Overrides:
setParameter in class AbstractWekaModel

toString

public java.lang.String toString()

getStatus

public java.lang.String getStatus(boolean verbose)
Specified by:
getStatus in class AbstractWekaModel

getClusterer

public Clusterer getClusterer()

setClusterer

public void setClusterer(Clusterer clusterer)

getEditor

public IAmbitEditor getEditor()

getProperties

public java.lang.String[] getProperties()